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RBFOX1

Alias

2BP1; A2BP1; FOX-1; FOX1; HRNBP1

Associated disorders

The RBFOX1 gene is associated with autosomal dominant idiopathic generalized epilepsy (PMID: 23350840, 24039908, 25950944, 26174448).

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RBFOX1

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Invitae tests that include this gene:

Invitae Epilepsy Panel up to 183 genes

Pathogenic variants in RBFOX1 are a rare cause of clinical cases of idiopathic generalized epilepsy.

RNA-binding proteins perform a variety of functions to ensure proper mRNA transcription, splicing, intracellular transport, and translation. The RBFOX1 gene encodes an RNA-binding protein expressed during brain development that influences mRNA splicing and alters transcription (PMID: 22730494).

Assay and technical information

Invitae is a College of American Pathologists (CAP)-accredited and Clinical Laboratory Improvement Amendments (CLIA)-certified clinical diagnostic laboratory performing full-gene sequencing and deletion/duplication analysis using next-generation sequencing technology (NGS).

Our sequence analysis covers clinically important regions of each gene, including coding exons, +/- 10 base pairs of adjacent intronic sequence, and select noncoding variants. Our assay provides a Q30 quality-adjusted mean coverage depth of 350x (50x minimum, or supplemented with additional analysis). Variants classified as pathogenic or likely pathogenic are confirmed with orthogonal methods, except individual variants that have high quality scores and previously validated in at least ten unrelated samples.

Our analysis detects most intragenic deletions and duplications at single exon resolution. However, in rare situations, single-exon copy number events may not be analyzed due to inherent sequence properties or isolated reduction in data quality. If you are requesting the detection of a specific single-exon copy number variation, please contact Client Services before placing your order.

Gene Transcript reference Sequencing analysis Deletion/Duplication analysis
RBFOX1 NM_145891.2; NM_018723.3