Ordering
  • Turnaround time:
    10–21 calendar days (14 days on average)
  • Preferred specimen:
    3mL whole blood in a purple-top tube
  • Alternate specimens:
    DNA or saliva/assisted saliva
  • Sample requirements
  • Request a sample kit
Billing
 

SETX

Alias

ALS4; AOA2; SCAR1; bA479K20.2

Associated disorders

The SETX gene is associated with autosomal recessive spinocerebellar ataxia 1 (SCAR1) (MedGen UID: 340052) and autosomal dominant amyotrophic lateral sclerosis 4 (ALS4) (MedGen UID: 355983).

Order single gene

SETX

Order this gene as a single gene test.


Order a test

Invitae tests that include this gene:

The SETX gene encodes the protein senataxin, a putative DNA/RNA helicase that plays a role in oxidative DNA damage repair and RNA transcription and processing.

Assay and technical information

Invitae is a College of American Pathologists (CAP)-accredited and Clinical Laboratory Improvement Amendments (CLIA)-certified clinical diagnostic laboratory performing full-gene sequencing and deletion/duplication analysis using next-generation sequencing technology (NGS).

Our sequence analysis covers clinically important regions of each gene, including coding exons, +/- 10 base pairs of adjacent intronic sequence in the transcript listed below. In addition, analysis covers the select non-coding variants specifically defined in the table below. Any variants that fall outside these regions are not analyzed. Any specific limitations in the analysis of these genes are also listed in the table below.

Our analysis detects most intragenic deletions and duplications at single exon resolution. However, in rare situations, single-exon copy number events may not be analyzed due to inherent sequence properties or isolated reduction in data quality. If you are requesting the detection of a specific single-exon copy number variation, please contact Client Services before placing your order.

Gene Transcript reference Sequencing analysis Deletion/Duplication analysis
SETX NM_015046.5